Brassica Database
The Brassica database BRAD was built initially to assist users apply Brassica rapa and Arabidopsis thaliana genomic data efficiently to their research. Oleracea followed by chromosome doubling a process known as allopolyploidy.
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Brassica database. A developing online-accessible knowledge and database system of cross-referenced information and resources on Brassicaceae Cruciferae taxonomy systematics and evolution including chromosome numbers traits and characters germplasm resources and accurate enumeration of all species genera and tribes. We therefore developed the Brassica Expression Database BrassicaEDB for the research community. Oleracea genome and comparisons with its relatives.
About this species Ensembl Plants release 51 -. The Brassica database BRAD is a web-based database of genetic data at the whole genome scale for important Brassica crops. Including snps and functional annotation of genes.
The European database for Brassica abbreviated Bras-EDB was developed by the Centre for Genetic Resources The Netherlands CGN. Oilseed rape Brassica napus L was formed 7500 years ago by hybridization between B. Together with more ancient polyploidsations this conferred an aggregate 72-fold genome multiplication since the origin of angiosperms and high gene content.
Oilseed rape Brassica napus was formed 7500 years ago by hybridisation between B. The objectives of this database are to support rationalization of Brassica germplasm conservation and to improve the access to the Brassica germplasm for users. In the current BrassicaEDB we only focused on the transcriptome level in rapeseed.
Napus pangenome GBrowse Fast Keyword Search. This site hosts Brassica genome databases. Some varieties are leafy vegetables while others are used to produce mustard from the seeds.
The genus Brassica contains several economically important crops including rapeseed Brassica napus 2 n 38 AACC the second largest source of seed oil and protein meal worldwide. We therefore developed the Brassica Expression Database BrassicaEDB for the research community. BRAD the genetics and genomics database for Brassica plants.
Links to available Brassica genome viewer and search are below. We conducted RNA sequencing RNA-Seq of 103 tissues from rapeseed cultivar ZhongShuang11 ZS11 at seven developmental stages seed germination seedling bolting initial flowering full-bloom podding and. A hybrid between B.
These genomes are rich resources for comparative genomics gene annotation and functional. In the current BrassicaEDB we only focused on the transcriptome level in rapeseed. The database focuses on passport data of the genus.
However research in rapeseed is hampered because it is complicated and time-consuming for researchers to access different types of expression data. Brassica napus GBrowse Viewers and Search. Napus cultivar Tapidor genome browser.
Together with more ancient polyploidizations this conferred an aggregate 72x genome multiplication since the origin of angiosperms and high gene content. BrassicaEDB - A Gene Expression Database for Brassica Crops. Although a few Brassica databases existed previously Bolbase is the first comprehensive database with a focus on the B.
OverviewCode created in. Brassica species belong to the Brassicaceae family which contains about 3700 species from 338. Brassica species include both vegetable and oilseed crops which are very important to the daily life of.
21995777 Cheng F Liu S Wu J Fang L Sun S Liu B Li P Hua W Wang X. Oleracea followed by chromosome doubling a process known as allopolyploidy. BRAD the genetics and genomics database for Brassica plants Abstract.
However research in rapeseed is hampered because it is complicated and time-consuming for researchers to access different types of expression data. However many Brassicaceae genomes have been sequenced and released after its construction. Fast search on functional annotation of genes.
Rapa obtained in cultivation principally in eastern Asia.
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